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# intro-to-ngs

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Tufts workshop December 2019

This repository contains instructional material for the workshop.

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The raw_data directory contains reads from NA12878 gene cyp on chromosome 10, from 1000 genome phase 3 release
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The ref_data directory contains a reference sequence from GrCh38 chromosome 10
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The all_commands.sh file contains all the commands we will use in the workshop.