Commit b75d91c5 authored by Rebecca E Batorsky's avatar Rebecca E Batorsky
Browse files

change directory

parent b355ed49
......@@ -17,7 +17,7 @@ mkdir -p $course_dir/results
bwa mem \
-M \
-t 2 \
-R "@RG\tID:SRR098401\tSM:NA12878" \
-R "@RG\tID:reads\tSM:NA12878" \
$course_dir/ref_data/chr10.fa \
$course_dir/raw_data/na12878_1.fq $course_dir/raw_data/na12878_2.fq \
> $course_dir/results/na12878.sam
......
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